coreEngine.Calibration

Class Organism

java.lang.Object

coreEngine.Calibration.Organism

Direct Known Subclasses:

CAFBinOrg, ConstrainedCap1Org, ConstrainedCap2Org, HybridDemandOrg, NDistOrg, PBDemOrg

public abstract class Organism
extends java.lang.Object

Author:

jltrask

Field Summary

Fields

Modifier and Type	Field and Description
GeneticAlgorithm	alg
int	capacityDropPct
protected float	fitness
static java.lang.String	FITNESS_TYPE
static java.lang.String	FITNESS_TYPE2
static boolean[][]	geometry
protected float[]	multiFitness
float	mutationPct
static int	numProfiles
static int[][]	profileMapping
protected int	scenIdx
int	seedIdx

Constructor Summary

Constructors

Constructor and Description
Organism(GeneticAlgorithm alg, int seedIdx)

Method Summary

Modifier and Type	Method and Description
abstract int	applyMeme()
abstract void	assignAFToSeed(int seg, int per)
protected abstract void	calcFitness()
float	checkFitnessDiversity(Organism org)
abstract Organism[]	crossover(Organism mate) Deprecated. @param mate
abstract Organism	getDeepCopy()
abstract float[]	getEncodingArray(int period)
abstract java.lang.String	getEncodingString()
float	getFitness()
int	getScenarioIndex()
static float	getSeedBaseFitness(Seed seed, AlgHelper fh)
int	getSeedIdx(int seedIdx)
abstract void	mutate()
static void	setGeometry(boolean[][] geometry)
void	setScenarioIndex(int scenarioIndex)
void	setSeedIdx(int seedIdx)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

alg

public final GeneticAlgorithm alg

fitness

protected float fitness

multiFitness

protected float[] multiFitness

scenIdx

protected int scenIdx

seedIdx

public int seedIdx

capacityDropPct

public int capacityDropPct

mutationPct

public float mutationPct

FITNESS_TYPE

public static java.lang.String FITNESS_TYPE

FITNESS_TYPE2

public static java.lang.String FITNESS_TYPE2

geometry

public static boolean[][] geometry

numProfiles

public static int numProfiles

profileMapping

public static int[][] profileMapping

Constructor Detail

Organism

public Organism(GeneticAlgorithm alg,
                int seedIdx)

Method Detail

crossover

public abstract Organism[] crossover(Organism mate)

Deprecated. @param mate

Returns:

mutate

public abstract void mutate()

getFitness

public float getFitness()

calcFitness

protected abstract void calcFitness()

getEncodingString

public abstract java.lang.String getEncodingString()

getEncodingArray

public abstract float[] getEncodingArray(int period)

assignAFToSeed

public abstract void assignAFToSeed(int seg,
                                    int per)

getDeepCopy

public abstract Organism getDeepCopy()

applyMeme

public abstract int applyMeme()

setGeometry

public static void setGeometry(boolean[][] geometry)

checkFitnessDiversity

public float checkFitnessDiversity(Organism org)

getScenarioIndex

public int getScenarioIndex()

setScenarioIndex

public void setScenarioIndex(int scenarioIndex)

getSeedIdx

public int getSeedIdx(int seedIdx)

setSeedIdx

public void setSeedIdx(int seedIdx)

getSeedBaseFitness

public static float getSeedBaseFitness(Seed seed,
                                       AlgHelper fh)