"0","# create a list of packages to be installed and active (required) for use in the notebook and resulting reports"
"0","packages <- c(""corrplot"", ""fBasics"", ""ggrepel"", ""ggthemes"", ""grDevices"", ""knitr"", ""rstudioapi"", ""scales"", ""tidyverse"")"
"0","# set defalut code chunks to ""echo=TRUE"" to display the code chunk inline with the narrative text; and report numbers to a default of three significant digits."
"0","knitr::opts_chunk$set(echo = FALSE)"
"0","options(digits = 3)"
"0","options(scipen = 999)"
"0","lapply(packages, require, character.only = T)"
"2","Loading required package: corrplot
"
"2","package ‘corrplot’ was built under R version 3.5.3"
"2","corrplot 0.84 loaded
"
"2","Loading required package: fBasics
"
"2","package ‘fBasics’ was built under R version 3.5.2"
"2","Loading required package: timeDate
"
"2","package ‘timeDate’ was built under R version 3.5.2"
"2","Loading required package: timeSeries
"
"2","package ‘timeSeries’ was built under R version 3.5.2"
"2","Loading required package: ggrepel
"
"2","package ‘ggrepel’ was built under R version 3.5.3"
"2","Loading required package: ggplot2
"
"2","package ‘ggplot2’ was built under R version 3.5.2"
"2","Loading required package: ggthemes
"
"2","package ‘ggthemes’ was built under R version 3.5.2"
"2","Loading required package: knitr
"
"2","package ‘knitr’ was built under R version 3.5.3"
"2","Loading required package: rstudioapi
"
"2","package ‘rstudioapi’ was built under R version 3.5.2"
"2","Loading required package: scales
"
"2","package ‘scales’ was built under R version 3.5.2"
"2","Loading required package: tidyverse
"
"2","package ‘tidyverse’ was built under R version 3.5.2"
"2","[37m-- [1mAttaching packages[22m --------------------------------------- tidyverse 1.2.1 --[39m
"
"2","[37m[32mv[37m [34mtibble [37m 2.0.1       [32mv[37m [34mpurrr  [37m 0.3.1  
[32mv[37m [34mtidyr  [37m 0.8.3       [32mv[37m [34mdplyr  [37m 0.8.0.[31m1[37m
[32mv[37m [34mreadr  [37m 1.3.1       [32mv[37m [34mstringr[37m 1.4.0  
[32mv[37m [34mtibble [37m 2.0.1       [32mv[37m [34mforcats[37m 0.4.0  [39m
"
"2","package ‘tibble’ was built under R version 3.5.2"
"2","package ‘tidyr’ was built under R version 3.5.2"
"2","package ‘readr’ was built under R version 3.5.2"
"2","package ‘purrr’ was built under R version 3.5.2"
"2","package ‘dplyr’ was built under R version 3.5.2"
"2","package ‘stringr’ was built under R version 3.5.2"
"2","package ‘forcats’ was built under R version 3.5.2"
"2","[37m-- [1mConflicts[22m ------------------------------------------ tidyverse_conflicts() --
[31mx[37m [34mreadr[37m::[32mcol_factor()[37m masks [34mscales[37m::col_factor()
[31mx[37m [34mpurrr[37m::[32mdiscard()[37m    masks [34mscales[37m::discard()
[31mx[37m [34mdplyr[37m::[32mfilter()[37m     masks [34mtimeSeries[37m::filter(), [34mstats[37m::filter()
[31mx[37m [34mdplyr[37m::[32mlag()[37m        masks [34mtimeSeries[37m::lag(), [34mstats[37m::lag()[39m
"
"1","[[1]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
"
"1","[[2]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
"
"1","[[3]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
"
"1","[[4]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
"
"1","[[5]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
"
"1","[[6]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
"
"1","[[7]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
"
"1","[[8]]
"
"1","[1]"
"1"," TRUE"
"1","
"
"1","
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"1","[[9]]
"
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"
"1","
"
"0","options(xtable.comment = F)"
"0","rm(packages)"
"0","# DEQ color palette for graphics using approximate match colors from grDevices package"
"0","DEQ_pal <- c('aquamarine4', 'steelblue4', 'lightseagreen', 'yellowgreen', 'darkorange1',"
"0","            'darkseagreen3', 'slateblue1', 'powderblue', 'khaki', 'lightsalmon',"
"0","            'seagreen4', 'deepskyblue4', 'darkslateblue', 'magenta4', 'palegreen4',"
"0","            'cyan4', 'goldenrod2', 'indianred3', 'seagreen')"
"0","# specifications for saving graphics files"
"0","graph_path <- file.path(""graphs/"")"
"0","width <- 12"
"0","height <- 8"
